mirror of
https://github.com/ClovertaTheTrilobita/cellpose-web.git
synced 2026-04-01 23:14:50 +00:00
117 lines
4 KiB
Python
117 lines
4 KiB
Python
import asyncio
|
||
from concurrent.futures import ThreadPoolExecutor
|
||
from flask import Flask, send_from_directory, request, jsonify
|
||
import os, shutil, time, threading, datetime, json, redis
|
||
from werkzeug.utils import secure_filename
|
||
from flask_cors import CORS
|
||
from pathlib import Path
|
||
from cp_run import Cprun
|
||
|
||
app = Flask(__name__)
|
||
CORS(app)
|
||
BASE_DIR = Path(__file__).resolve().parent
|
||
UPLOAD_DIR = BASE_DIR / "uploads"
|
||
os.makedirs(UPLOAD_DIR, exist_ok=True)
|
||
executor = ThreadPoolExecutor(max_workers=4)
|
||
TASKS = {}
|
||
r = redis.Redis(host="127.0.0.1", port=6379, db=0)
|
||
|
||
# 启动测试服务器
|
||
def run_dev():
|
||
app.run(host="10.147.18.141", port=5000)
|
||
|
||
def set_status(task_id, status, **extra):
|
||
payload = {"status": status, "updated_at": datetime.datetime.utcnow().isoformat(), **extra}
|
||
r.set(f"task:{task_id}", json.dumps(payload), ex=86400) # 1 天过期
|
||
|
||
def get_status(task_id):
|
||
raw = r.get(f"task:{task_id}")
|
||
return json.loads(raw) if raw else None
|
||
|
||
@app.route("/")
|
||
def index():
|
||
return "<h1>Hello</h1><p>This is the backend of our cellpose server, please visit our website.</p>"
|
||
|
||
@app.get("/testdl")
|
||
def test_download():
|
||
return send_from_directory("test_output/2025-09-16-20-03-51", "img_overlay.png", as_attachment=True)
|
||
|
||
@app.get("/dl/<timestamp>")
|
||
def download(timestamp):
|
||
input_dir = os.path.join(BASE_DIR, "output", timestamp)
|
||
output_dir = os.path.join(BASE_DIR, "output/tmp", timestamp) # 不要加 .zip，make_archive 会自动加
|
||
os.makedirs(BASE_DIR / "output/tmp", exist_ok=True) # 确保 tmp 存在
|
||
shutil.make_archive(output_dir, 'zip', input_dir)
|
||
print(f"压缩完成: {output_dir}.zip")
|
||
return send_from_directory("output/tmp", f"{timestamp}.zip", as_attachment=True)
|
||
|
||
@app.post("/upload")
|
||
def upload():
|
||
"""
|
||
接收上传的文件，并将其发送给cellpose。
|
||
:return:
|
||
"""
|
||
|
||
# 从请求中获取参数，若没有则设定为默认值
|
||
model = request.args.get("model") or request.form.get("model") or "cpsam"
|
||
|
||
def _to_float(x, default):
|
||
try:
|
||
return float(x)
|
||
except (TypeError, ValueError):
|
||
return default
|
||
|
||
flow_threshold = _to_float(request.args.get("flow_threshold") or request.form.get("flow_threshold"), 0.4)
|
||
cellprob_threshold = _to_float(request.args.get("cellprob_threshold") or request.form.get("cellprob_threshold"),
|
||
0.0)
|
||
diameter_raw = request.args.get("diameter") or request.form.get("diameter")
|
||
diameter = _to_float(diameter_raw, None) if diameter_raw not in (None, "") else None
|
||
|
||
# 将文件保存在本地目录中
|
||
ts = datetime.datetime.now().strftime("%Y-%m-%d-%H-%M-%S") + f"-{int(time.time()*1000)%1000:03d}"
|
||
os.makedirs(UPLOAD_DIR / ts, exist_ok=True)
|
||
files = request.files.getlist("files")
|
||
saved = []
|
||
for f in files:
|
||
if not f or f.filename == "":
|
||
continue
|
||
name = secure_filename(f.filename)
|
||
f.save(os.path.join(UPLOAD_DIR / ts, name))
|
||
saved.append(os.path.join(UPLOAD_DIR, ts, name))
|
||
|
||
# 新建一个线程，防止返回被阻塞
|
||
def job():
|
||
return asyncio.run(Cprun.run(
|
||
images=saved, model=model,
|
||
cellprob_threshold=cellprob_threshold,
|
||
flow_threshold=flow_threshold,
|
||
diameter=diameter, time=ts
|
||
))
|
||
|
||
# 将线程状态存入redis
|
||
set_status(ts, "running")
|
||
fut = executor.submit(job)
|
||
|
||
def done_cb(f):
|
||
try:
|
||
f.result()
|
||
set_status(ts, "success")
|
||
except Exception as e:
|
||
set_status(ts, "failed", error=str(e))
|
||
|
||
fut.add_done_callback(done_cb)
|
||
|
||
return jsonify({"ok": True, "count": len(saved), "id": ts})
|
||
|
||
@app.get("/status/")
|
||
def status():
|
||
"""
|
||
检查某一cellpose任务是否完成
|
||
|
||
:return:
|
||
"""
|
||
task_id = request.args.get('id')
|
||
st = get_status(task_id)
|
||
if not st:
|
||
return jsonify({"ok": True, "exists": False, "status": "not_found"}), 200
|
||
return jsonify({"ok": True, "exists": True, **st}), 200
|